Scaffold Ga0068513_1002495

Overview

Basic Information

• Taxon OID: 3300004951
• Scaffold ID: Ga0068513_1002495
• Source Dataset Name: Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-EVs
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Chunlab, Inc
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1931
• Total Scaffold Genes: 6
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 3

Taxonomy: All Organisms → Viruses → Predicted Viral (Source: DeepVirFinder)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water → Marine And Wastewater Microbial Communities From Korea, With Extracellular Vesicles

Source Dataset Sampling Location

• Location Name: East Sea, Korea
• Coordinates
  • Lat. (^o): 37.0
  • Long. (^o): 131.0

Associated Families

Family	Category	Number of Sequences	3D Structure?
F007304	Metagenome / Metatranscriptome	353	Y
F070006	Metagenome / Metatranscriptome	123	N
F084184	Metagenome	112	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0068513_10024951	F007304	N/A	YIYIYIYKAKKMKFDLKIDYLGKKELKGDTEKDMYHLTFKTYNASIEGKFEKSEIRHIIQILDNAVV*
Ga0068513_10024953	F084184	N/A	MQFNLNTEQQDAILYAVSHTLANKGDMSNQTLNDLYDILDMFKEEESKRYGLYSGTHEGL
Ga0068513_10024954	F070006	N/A	MQSKITQIEPKGTYTNASGTFNKYQVYLANGNNYQFLAKGDFKKQVGENIDFEVTNEQYNTAKLIYNKPIQAAPTANREQIIVRQSMVKAAADFHASRPNADIQTVIADAQLLINFVNNG