Scaffold Ga0068517_1000568

Overview

Basic Information

• Taxon OID: 3300004901
• Scaffold ID: Ga0068517_1000568
• Source Dataset Name: Wastewater microbial communities from Nanji, Korea with extracellular vesicles - Nanji-EVs
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Chunlab, Inc
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 5042
• Total Scaffold Genes: 12
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 10 (83.33%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (100.00%)
• Associated Families: 2

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Unclassified → Unclassified → Unclassified → Wastewater → Marine And Wastewater Microbial Communities From Korea, With Extracellular Vesicles

Source Dataset Sampling Location

• Location Name: Nanji, South Korea
• Coordinates
  • Lat. (^o): 37.3132
  • Long. (^o): 126.828

Associated Families

Family	Category	Number of Sequences	3D Structure?
F048174	Metagenome / Metatranscriptome	148	Y
F075867	Metagenome / Metatranscriptome	118	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0068517_10005685	F075867	GAGG	MKTTLKPSSKHFLQYDAATFEREGFKTLNGRISQLALEPRFWSVSVKVITENFEGTEKIKDHFNFKTSERCKLSDLREQVKKEVLDKDDYLPVCTQCLVTARVMM*
Ga0068517_10005687	F048174	GAG	MSDKGQSNNKDVQSHSEVVEALLKAEIERLKQDLDRLHRERDAFSRQCSVMAEENAVWEAESKRLTWMIQNHGRVEFEFSGDCYVTFILKNQFKATLGSDDTRVEIDRAMEMCK*