Basic Information | |
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Taxon OID | 3300004831 Open in IMG/M |
Scaffold ID | Ga0069134_170782 Open in IMG/M |
Source Dataset Name | Marine surface microbial communities from the North Atlantic Ocean - filtered matter |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Molecular Research LP (MR DNA) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 766 |
Total Scaffold Genes | 4 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 3 (75.00%) |
Novel Protein Genes | 3 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 2 (66.67%) |
Associated Families | 3 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Coastal → Unclassified → Surface Seawater → Marine Surface Microbial Communities From The North Atlantic Ocean, Enriched With Methanesulfonate |
Source Dataset Sampling Location | ||||||||
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Location Name | Leca da Palmeira, Matosinhos | |||||||
Coordinates | Lat. (o) | 41.226956 | Long. (o) | -8.720528 | Alt. (m) | Depth (m) | 0 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F009691 | Metagenome / Metatranscriptome | 314 | Y |
F023367 | Metagenome / Metatranscriptome | 210 | N |
F041244 | Metagenome | 160 | N |
Protein ID | Family | RBS | Sequence |
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Ga0069134_1707822 | F009691 | AGGAG | MKSELNSKDYVTFARKFVKETVDIMDIEELKSIVSDRIHEMIQEQEDTYGQEGAFEEMKSWDEGTFLSIAEDFELELEGV* |
Ga0069134_1707823 | F023367 | GGAGG | MTKTKFIFEEKFISYANVEIYAENEEDARLQFQNGNYQYYDVSDFTEGHELISVTEEEPVNYYQGA* |
Ga0069134_1707824 | F041244 | N/A | NAIAVSDWESFTELTPDELSHLFGYVFTMCVLKRDYVKVGYYSKAFGGTNND* |
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