Scaffold Ga0069134_169196

Overview

Basic Information

• Taxon OID: 3300004831
• Scaffold ID: Ga0069134_169196
• Source Dataset Name: Marine surface microbial communities from the North Atlantic Ocean - filtered matter
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Molecular Research LP (MR DNA)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 513
• Total Scaffold Genes: 2
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 2 (100.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (100.00%)
• Associated Families: 2

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage Mosig EXVC030M (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Coastal → Unclassified → Surface Seawater → Marine Surface Microbial Communities From The North Atlantic Ocean, Enriched With Methanesulfonate

Source Dataset Sampling Location

• Location Name: Leca da Palmeira, Matosinhos
• Coordinates
  • Lat. (^o): 41.226956
  • Long. (^o): -8.720528
  • Depth (m): 0

Associated Families

Family	Category	Number of Sequences	3D Structure?
F003514	Metagenome / Metatranscriptome	482	Y
F004191	Metagenome / Metatranscriptome	449	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0069134_1691961	F004191	GGAG	MNKFKEIMATWFAVLGILAIVGSAGAVETDQWMLAFTLFVIGTGTMFISIVCQEKQ*
Ga0069134_1691962	F003514	AGGAG	MNTILKNSTAYTSEDLILKAAKSSGAKKAEILHGSLFVTFTPGFVDVISNELKNVLEKLLDNTTVKMYNLKNNEYAYDFI*