Scaffold Ga0068515_102283

Overview

Basic Information

• Taxon OID: 3300004829
• Scaffold ID: Ga0068515_102283
• Source Dataset Name: Marine water microbial communities from the Pohang Bay, Korea with extracellular vesicles - Pohang-EVs
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Chunlab, Inc
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 2448
• Total Scaffold Genes: 6
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 3 (50.00%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (33.33%)
• Associated Families: 3

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Water → Marine And Wastewater Microbial Communities From Korea, With Extracellular Vesicles

Source Dataset Sampling Location

• Location Name: South Korea: Pohang-si, Gyeongsangbuk-do
• Coordinates
  • Lat. (^o): 36.03776
  • Long. (^o): 129.386

Associated Families

Family	Category	Number of Sequences	3D Structure?
F014012	Metagenome	266	Y
F032871	Metagenome	179	Y
F082806	Metagenome	113	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0068515_1022831	F032871	N/A	KATAGGGSAQLDLSAYIDPIARGRQKGTGLAIYKTHFSILNSEDANEMAPETSETGVLAYSLQAGAGLGDIATGGTQTAAGATAFDASNQLLVSAGVFYGTASGATSTPIGMDYIMPSKDVPYVVVRDNVCLVYNVSASGLFESDSTLACRLECAIVTLDQATLNQLLRTQTV*
Ga0068515_1022835	F014012	N/A	MVKDKFTFGSTSVMREVPPGKHAVISFTGKMEEVETEWGPKCSFALTLYSHPSYESISNDGIETIWQSKSQCAEQLLRAASEGMPELTKALKEKWKLIRTEEGTYFIEQL*
Ga0068515_1022836	F082806	AGG	MAYDLKNVFYLDVSTEITKATAGGGSAQLDLSAYIDPIARGRQKGTGLAIYKTHFSIL