Scaffold Ga0068515_100396

Overview

Basic Information

• Taxon OID: 3300004829
• Scaffold ID: Ga0068515_100396
• Source Dataset Name: Marine water microbial communities from the Pohang Bay, Korea with extracellular vesicles - Pohang-EVs
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Chunlab, Inc
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 5565
• Total Scaffold Genes: 16
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 2 (12.50%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 3

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Water → Marine And Wastewater Microbial Communities From Korea, With Extracellular Vesicles

Source Dataset Sampling Location

• Location Name: South Korea: Pohang-si, Gyeongsangbuk-do
• Coordinates
  • Lat. (^o): 36.03776
  • Long. (^o): 129.386

Associated Families

Family	Category	Number of Sequences	3D Structure?
F019993	Metagenome / Metatranscriptome	226	Y
F025232	Metagenome / Metatranscriptome	202	Y
F095365	Metagenome / Metatranscriptome	105	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0068515_10039613	F019993	N/A	LLFVNFVVMNKEVKLLLAAGIGYLGFKAYQIYTAISKLSFAPTGINFSIIKERGAIGGTLFVDIINPTAANVAVDGFTGTVTTTSGTLVGDYKGAAMVLRPGVNNVRISWGSRATTTLIPLAIAMFKGNFPVLKFNTVFNVKGFPIPTSFTMNTKDYAPVLK*
Ga0068515_10039616	F095365	N/A	MEKYLLAAYELYRQDVKENYLSFEQFKAAICKPSTPFWVWLASGAAIGYSLKK*
Ga0068515_1003966	F025232	N/A	MENVNEKVLADYRLIVSRLDIMKGEVDELNRANWKLRKAFNELLDLYQEELDRRDSLTDRGDTQYYWCEKAGILN*