Scaffold Ga0068515_100068

Overview

Basic Information

• Taxon OID: 3300004829
• Scaffold ID: Ga0068515_100068
• Source Dataset Name: Marine water microbial communities from the Pohang Bay, Korea with extracellular vesicles - Pohang-EVs
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Chunlab, Inc
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 17194
• Total Scaffold Genes: 30
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 24 (80.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (100.00%)
• Associated Families: 2

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Water → Marine And Wastewater Microbial Communities From Korea, With Extracellular Vesicles

Source Dataset Sampling Location

• Location Name: South Korea: Pohang-si, Gyeongsangbuk-do
• Coordinates
  • Lat. (^o): 36.03776
  • Long. (^o): 129.386

Associated Families

Family	Category	Number of Sequences	3D Structure?
F005751	Metagenome / Metatranscriptome	391	Y
F042374	Metagenome	158	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0068515_10006824	F042374	GGAG	MKKSKLIFTLLLAVVIGGCSTMPIVDSRGKSSANIKGDMNRFHDDYYTCKSLVEDQTSYVWDKSKAVYNNLRWRVLWLSPKANTRKDFVNRCLEGRGYNVINK*
Ga0068515_10006828	F005751	GGAG	MSDIYSLQFDPHKISHQQEELGMTFADLDTAVELMKKEEKMIVAELTLQFSRQKMYKNMKELDGLIYNHEKFRDFTERYSETLKKRNRAKIRFESFKAFRDDLRTKVVNERELAKNL*