Basic Information | |
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Taxon OID | 3300004600 Open in IMG/M |
Scaffold ID | Ga0068964_1280123 Open in IMG/M |
Source Dataset Name | Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 56 (Metagenome Metatranscriptome) |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1582 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil → Peatlands Soil Microbial Communities From Germany And Austria, That Are Sulfate Reducing |
Source Dataset Sampling Location | ||||||||
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Location Name | Germany: Weissenstadt | |||||||
Coordinates | Lat. (o) | 50.13 | Long. (o) | 11.88 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F040246 | Metagenome / Metatranscriptome | 162 | N |
Protein ID | Family | RBS | Sequence |
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Ga0068964_12801232 | F040246 | GAGG | MRHDHLSGVGSRHVIAERQVPTMSSNLEDWETQQEAKHAAAHKKGPLSFLAGGGAVASRREQEELRVSDALAQEAEERHKKLVAASMKALRDATFPDEIEHYCDVLLKLNLTSMEQEELRKLLWEKFR* |
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