Scaffold JGI26667J51740_10143340

Overview

Basic Information

• Taxon OID: 3300003906
• Scaffold ID: JGI26667J51740_10143340
• Source Dataset Name: Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius vacuus BAHAMAS.2
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 664
• Total Scaffold Genes: 2
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 2

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Annelida → Digestive System → Unclassified → Unclassified → Marine Gutless Worms Symbiont → Marine Gutless Worms Symbiont Microbial Communities From Various Locations

Source Dataset Sampling Location

• Location Name: Bremen, Bremen, Germany
• Coordinates
  • Lat. (^o): 53.109679
  • Long. (^o): 8.847516

Associated Families

Family	Category	Number of Sequences	3D Structure?
F068202	Metagenome	125	Y
F098161	Metagenome	104	Y

Sequences

Protein ID	Family	RBS	Sequence
JGI26667J51740_101433401	F068202	N/A	MSCDLTSLKKSSFDCLNLAKQRYSILSEMMLFRHYCIFSGSAEALVRCGGKL
JGI26667J51740_101433402	F098161	N/A	MSMDSITEVFYHLNITLIATKHIADNHLSFSKIAHWHILYATQSKPLNSPFLTYDPKSPDVIGEHH*