Basic Information | |
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Taxon OID | 3300003702 Open in IMG/M |
Scaffold ID | PicMicro_10000123 Open in IMG/M |
Source Dataset Name | Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Microbial Assembly |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | University of Michigan |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 83950 |
Total Scaffold Genes | 89 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 36 (40.45%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Marine, Hydrothermal Vent Plume → Hydrothermal Vent Plume Microbial Communities From The Mid Cayman Rise - Piccard2013-Plume |
Source Dataset Sampling Location | ||||||||
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Location Name | Mid-Cayman Rise, Caribbean Sea | |||||||
Coordinates | Lat. (o) | 18.55 | Long. (o) | 81.716667 | Alt. (m) | Depth (m) | 5000 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F074974 | Metagenome / Metatranscriptome | 119 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
PicMicro_1000012387 | F074974 | AGGA | MKSPKKELPLDDLFLQITKWRVEAASSHNDGWTRQHYQRMLDEVKRDLNKSLREIEEAEMLDNYD* |
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