Scaffold BLZD_1000605

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold BLZD_1000605

Scaffold BLZD_1000605

Overview

Basic Information
Taxon OID	3300003641 Open in IMG/M
Scaffold ID	BLZD_1000605 Open in IMG/M
Source Dataset Name	Belize Diploria
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	2730
Total Scaffold Genes	4 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	2 (50.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Host-Associated → Invertebrates → Cnidaria → Unclassified → Unclassified → Cnidaria → Cnidaria Microbial Communities From The Caribbean, With Black Band Disease

Source Dataset Sampling Location
Location Name	Belize: Carrie Bow Cay Field Station
Coordinates	Lat. (^o)	16.80288	Long. (^o)	-88.08213	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F017437	Metagenome / Metatranscriptome	240	Y

Sequences

Protein ID	Family	RBS	Sequence
BLZD_10006054	F017437	AGGAG	VSEREFTRLVDRSVGRSLGRKLLFVFPLTNAQLDLTKRKTSSNGLANVKHSEAMSDEIVTAMSTACGASIFLFELFKKNLESICCPSYEMN

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