Scaffold FS900DNA_10009992

Overview

Basic Information

• Taxon OID: 3300003542
• Scaffold ID: FS900DNA_10009992
• Source Dataset Name: Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS900_Dependable_DNA
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1766
• Total Scaffold Genes: 6
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 4
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 4

Taxonomy: All Organisms → Viruses → Predicted Viral (Source: DeepVirFinder)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent → Diffuse Hydrothermal Flow Volcanic Vent Microbial Communities From Axial Seamount, Northeast Pacific Ocean

Source Dataset Sampling Location

• Location Name: Axial seamount, northeast pacific ocean
• Coordinates
  • Lat. (^o): 45.87992
  • Long. (^o): -129.80294
  • Depth (m): 1917

Associated Families

Family	Category	Number of Sequences	3D Structure?
F027866	Metagenome / Metatranscriptome	193	Y
F033960	Metagenome	176	Y
F050421	Metagenome	145	Y
F079211	Metagenome / Metatranscriptome	116	Y

Sequences

Protein ID	Family	RBS	Sequence
FS900DNA_100099921	F027866	N/A	MKTYKTYQARNAVKAAQVTNHIIAQKKLGVAHEVAKAEAYRLYQIKAASPILLRHWGI*
FS900DNA_100099924	F033960	N/A	MKLTFIKIMKQYEATYTNESPQEYPNGKVTLHRRSTDARVKHPVPMGTYHIMNWHTYSDIGQDLETAQVWNPITKRLFEIYSTDEGETFTFDI*
FS900DNA_100099925	F050421	N/A	MTIENKTLKVGDEIRFGMQLMIVDEITEFDTIIAIDEDGQDFELTENEVDIY*
FS900DNA_100099926	F079211	N/A	VWYTRRMKNMKNKIKTYNVEFTTAFAGSRFVNIVLEAIDKHQAEWVARNLCRFGYISNTTETDEVAAFKESTHDWAYDED*