Scaffold FS891DNA_10186531

Overview

Basic Information

• Taxon OID: 3300003539
• Scaffold ID: FS891DNA_10186531
• Source Dataset Name: Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS891_Anemone_DNA
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1323
• Total Scaffold Genes: 4
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 2 (50.00%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (33.33%)
• Associated Families: 3

Taxonomy: All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent → Diffuse Hydrothermal Flow Volcanic Vent Microbial Communities From Axial Seamount, Northeast Pacific Ocean

Source Dataset Sampling Location

• Location Name: Axial seamount, northeast pacific ocean
• Coordinates
  • Lat. (^o): 45.933231
  • Long. (^o): -130.013645
  • Depth (m): 1542

Associated Families

Family	Category	Number of Sequences	3D Structure?
F040140	Metagenome	162	N
F054107	Metagenome / Metatranscriptome	140	N
F081448	Metagenome / Metatranscriptome	114	N

Sequences

Protein ID	Family	RBS	Sequence
FS891DNA_101865312	F040140	N/A	MPKFGKKFEDTGYDGSQHWKVLHDEVIMIECDYCKEKGIKLMRGLHDSVNLHLGKKAQHPKDLDFALKHIVWSKKQLEPGLKCELC*
FS891DNA_101865313	F081448	AGG	VKALDVLTDIIKNKNLAKEYALQESKDLRVLSPKKDTALACLLSGIESVETIPEWVKTSWFNWIFYAMRMISDKEVDALAESMSKGLEEYKMAYFSQEFIESLPEEKRPAAEALLHPHLLKLKGSRTTMEETLKEWRI*
FS891DNA_101865314	F054107	N/A	QKVQEKDKLLNDMAMALKSQQDVLVNTPPPEVPGSEAERNQPMTKGDFFQIIKDGIQLLRQQTEGVDPRIERAIDMQDKLVDAMWEKMARALISDKDAAPGVS*