Scaffold FS891DNA_10130986

Overview

Basic Information

• Taxon OID: 3300003539
• Scaffold ID: FS891DNA_10130986
• Source Dataset Name: Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS891_Anemone_DNA
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1681
• Total Scaffold Genes: 5
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 4 (80.00%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 3 (100.00%)
• Associated Families: 3

Taxonomy: All Organisms → Viruses → Predicted Viral (Source: DeepVirFinder)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent → Diffuse Hydrothermal Flow Volcanic Vent Microbial Communities From Axial Seamount, Northeast Pacific Ocean

Source Dataset Sampling Location

• Location Name: Axial seamount, northeast pacific ocean
• Coordinates
  • Lat. (^o): 45.933231
  • Long. (^o): -130.013645
  • Depth (m): 1542

Associated Families

Family	Category	Number of Sequences	3D Structure?
F011529	Metagenome / Metatranscriptome	290	Y
F035723	Metagenome	171	Y
F096068	Metagenome / Metatranscriptome	105	N

Sequences

Protein ID	Family	RBS	Sequence
FS891DNA_101309862	F011529	GAGG	MSWEKWSKRKTIYELEGIRLRSARLWLDENGFHPFLDQNELTRPDLQKSMGCKYDELPRGAWAIMDKYDEALAKRSKYAT*
FS891DNA_101309864	F035723	AGGAG	MALVTNKVEETNHLRGKSKFYVAGWVANRECENPQVLPESCKGDTVVERWHEEYLSGYGDSFANGECLNPPVED*
FS891DNA_101309865	F096068	GGAGG	MALLKDIVDFCKTELNIPQDVLVSVEREDISEDNVKGWTTDSAEDDEYDIEIDSRLSFKETILTV