Scaffold DRAFT_10052041

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold DRAFT_10052041

Scaffold DRAFT_10052041

Overview

Basic Information
Taxon OID	3300003523 Open in IMG/M
Scaffold ID	DRAFT_10052041 Open in IMG/M
Source Dataset Name	Camel rumen microbial communities from Jandagh-Isfahan, Iran - Sample 1
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Beijing Genomics Institute (BGI)
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	2854
Total Scaffold Genes	5 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	4 (80.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
All Organisms → Viruses → Predicted Viral	(Source: DeepVirFinder)

Ecosystem & Geography

Source Dataset Ecosystem
Host-Associated → Mammals → Digestive System → Foregut → Rumen → Camel Rumen → Camel Rumen Microbial Communities From Jandagh-Isfahan, Iran

Source Dataset Sampling Location
Location Name	Jandaq, Isfahan Province, Iran
Coordinates	Lat. (^o)	34.041281	Long. (^o)	54.414582	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F012184	Metagenome / Metatranscriptome	282	Y

Sequences

Protein ID	Family	RBS	Sequence
DRAFT_100520412	F012184	AGGAG	MNVNEILNAILSLSPDASMARQNKTNFIVVPCDDGVAKVSVGVALAKDTKTCKAFNLEAAKAEYKAWEAEKALREAEKASKPVKAKGVNPEAQARRDALDKAIAEMPAFADYTATDILNALAGVVPENTLVMAIGSSAKRLVENGTLVVREDEKGKKYYTKH*

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