Scaffold nap3_10069569

Overview

Basic Information

• Taxon OID: 3300003477
• Scaffold ID: nap3_10069569
• Source Dataset Name: Estuarine microbial communities from the Sarno estuary, Gulf of Naples, Italy - Sample Station 3
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 811
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (33.33%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (33.33%)
• Associated Families: 3

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Estuarine → Estuary Microbial Community From Gulf Of Naples, Italy

Source Dataset Sampling Location

• Location Name: Gulf of Naples
• Coordinates
  • Lat. (^o): 40.7255
  • Long. (^o): 14.44767
  • Depth (m): 0

Associated Families

Family	Category	Number of Sequences	3D Structure?
F053336	Metagenome	141	Y
F054095	Metagenome	140	N
F095345	Metagenome	105	N

Sequences

Protein ID	Family	RBS	Sequence
nap3_100695691	F095345	N/A	MSELRIIKERRFYDEHGTKKFALLEEGQTVKIDSHPRSGSGPLLCRVVNPSEASKDFGVRDGMLVEVDWEDLGFEL*
nap3_100695692	F054095	N/A	MIPQWKMNGKDMRFNGETEIGIVEVRDLFDDLVVTLWVDQEESGNITVKSLGGVGNGRYDVQVVARKRPAEEGEGWKEL*
nap3_100695693	F053336	GAGG	MERTMNEYFVYLTDLRDGGSMNRMWGPTMLQSRFDLSVKESREVFQKWCESLAQS*