Basic Information | |
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Taxon OID | 3300003474 Open in IMG/M |
Scaffold ID | NAP4_1007728 Open in IMG/M |
Source Dataset Name | Estuarine microbial communities from the Sarno estuary, Gulf of Naples, Italy - Sample Station 4 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1819 |
Total Scaffold Genes | 4 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 3 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 3 |
Taxonomy | |
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All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp. | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Estuarine → Estuary Microbial Community From Gulf Of Naples, Italy |
Source Dataset Sampling Location | ||||||||
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Location Name | Sarno river estuary, Gulf of Naples | |||||||
Coordinates | Lat. (o) | 40.72683 | Long. (o) | 14.46133 | Alt. (m) | Depth (m) | 0 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F012280 | Metagenome / Metatranscriptome | 282 | Y |
F020899 | Metagenome | 221 | N |
F030730 | Metagenome / Metatranscriptome | 184 | Y |
Protein ID | Family | RBS | Sequence |
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NAP4_10077282 | F020899 | N/A | MKKYLILILLLLVACQKDEIGIVEPEVIEYEMIFEESQSSVTDGQEYSFEISLEEEHQLILSKDGNVIAKESFLPTLGINTKTIYTKSLPIDLLKFELINPTGVIKTTFIQIY* |
NAP4_10077283 | F012280 | N/A | MPVKIKPSTKDYLRDARGKMTSKWVWKHYTVSNTSTEELKKLYDSPSYKRKKEVIKRELERRGVWENLKKK* |
NAP4_10077284 | F030730 | N/A | MGKLKEKIIEKGSGLVAKSKTKKQLEKFLPKPVAKQIGKKVGKGVESITSKAMDLWNKFKK* |
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