Basic Information | |
---|---|
Taxon OID | 3300003319 Open in IMG/M |
Scaffold ID | soilL2_10002746 Open in IMG/M |
Source Dataset Name | Sugarcane bulk soil Sample L2 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 27885 |
Total Scaffold Genes | 37 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 22 (59.46%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
All Organisms → cellular organisms → Bacteria | (Source: IMG/M) |
Source Dataset Ecosystem |
---|
Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil → Sugarcane Root And Bulk Soil Microbial Communities From Ayr, Burdekin, Queensland Australia |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | Ayr, Queensland Australia | |||||||
Coordinates | Lat. (o) | -19.733298 | Long. (o) | 147.17873 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F033947 | Metagenome | 176 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
soilL2_1000274615 | F033947 | GAGG | MKFRLYLFMLLLSIAGATLTYAQGEKKPRTIADYRPRMLRELNTLLPEVFRAALAERGVEGNKDMKQIVHGELFPSRVKVVYSGTQRPLLEDKRNVIIGWANQFAGAPEFYTKPYQTELLFTEGDEKYWLAVHKDLLDHDWKRGDALELCVIKMGNVRIGTEFEPVLLVEQEIRE* |
⦗Top⦘ |