Scaffold Water_101580

Overview

Basic Information

• Taxon OID: 3300002930
• Scaffold ID: Water_101580
• Source Dataset Name: Estuary water microbial communities from Pearl Estuary, Zhujiang, China
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 4195
• Total Scaffold Genes: 13
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 13 (100.00%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 3 (100.00%)
• Associated Families: 3

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuary Water → Estuary Water Microbial Communities From Pearl Estuary, Zhujiang, China

Source Dataset Sampling Location

• Location Name: Pearl Estuary, Zhujiang, China
• Coordinates
  • Lat. (^o): 22.67
  • Long. (^o): 113.71
  • Depth (m): 6

Associated Families

Family	Category	Number of Sequences	3D Structure?
F019099	Metagenome	231	Y
F085340	Metagenome	111	Y
F089785	Metagenome	108	Y

Sequences

Protein ID	Family	RBS	Sequence
Water_1015803	F085340	AGGAGG	MNDFELMQYWRAVPHPQKEVEQRVLTFGHAIYKQAYKEAREELRHSFYSGMAVGHEDCKPALQKALSAMESAYYILKIQPVTPNQEADTLALAIQSVNDALEKLG*
Water_1015805	F019099	GAGG	MIINGKIVKDWDKSQISTGYIQPNRFRIITWDMGRFQSWLLGKQPLSRSILEKVIR*
Water_1015809	F089785	GGA	MNPTVDQLLDMLLDGDPVAWEISRTPGGLRIVGLMRNGETRVLATVPILSNEVKND*