Scaffold Water_100926

Overview

Basic Information

• Taxon OID: 3300002930
• Scaffold ID: Water_100926
• Source Dataset Name: Estuary water microbial communities from Pearl Estuary, Zhujiang, China
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 5784
• Total Scaffold Genes: 15
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 7 (46.67%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (66.67%)
• Associated Families: 3

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuary Water → Estuary Water Microbial Communities From Pearl Estuary, Zhujiang, China

Source Dataset Sampling Location

• Location Name: Pearl Estuary, Zhujiang, China
• Coordinates
  • Lat. (^o): 22.67
  • Long. (^o): 113.71
  • Depth (m): 6

Associated Families

Family	Category	Number of Sequences	3D Structure?
F002928	Metagenome	520	Y
F005373	Metagenome	403	N
F099217	Metagenome	103	N

Sequences

Protein ID	Family	RBS	Sequence
Water_1009264	F005373	AGAAGG	MNEGLENIKQIDDLENKVKTLSDHLAGMCCQADEDTPSEYRTEHFRSTMDDAYEYLEKIGYFKK*
Water_1009265	F002928	N/A	MKNYLVKFKCVIGDYEHIDYMLFNKKKSEWGYCKEFWGISKKDELKENCFWDDWMQNAISVYSETEITDKQVKTLKELGVIY*
Water_1009267	F099217	GAGG	MTEQTDRLIAEMELEKRKSKRASNGFKFHYNTIGDCFYDIYCQPNYTKKEDLLKDMARILNGELTPEDFKTEILQWVSERSDECYLDDDCQIRRFDEVKEGSVSVPIAKQGRS*