Basic Information | |
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Taxon OID | 3300002930 Open in IMG/M |
Scaffold ID | Water_100404 Open in IMG/M |
Source Dataset Name | Estuary water microbial communities from Pearl Estuary, Zhujiang, China |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 9449 |
Total Scaffold Genes | 18 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 12 (66.67%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Associated Families | 2 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuary Water → Estuary Water Microbial Communities From Pearl Estuary, Zhujiang, China |
Source Dataset Sampling Location | ||||||||
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Location Name | Pearl Estuary, Zhujiang, China | |||||||
Coordinates | Lat. (o) | 22.67 | Long. (o) | 113.71 | Alt. (m) | Depth (m) | 6 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F022858 | Metagenome / Metatranscriptome | 212 | Y |
F091975 | Metagenome / Metatranscriptome | 107 | Y |
Protein ID | Family | RBS | Sequence |
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Water_1004044 | F022858 | AGG | MKKTIDTIKGNLKTILSFADSEFLELLIAILHTFLLPLAVWTEIGFKWHVIFLAVGGGLFQFYSVGIRDLRCRYYSTIVATFVAILTAEQYLMNGLMFEAPSRFGWLIIAFAAIVNQIRVTKQWKHKN* |
Water_1004045 | F091975 | N/A | METQELIIAVATILGSGAAFKFYEYSIKTKRDAARELRQERRAENPETMFRDDLKKRVEEMSVALDSANLKILELTQKVAELETENRYLHREIDILKRK* |
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