Scaffold BMAI_1137404

Overview

Basic Information

• Taxon OID: 3300002822
• Scaffold ID: BMAI_1137404
• Source Dataset Name: Illumina_Fosmid_Bertioga
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 621
• Total Scaffold Genes: 1
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Cephalochordata → Leptocardii → Amphioxiformes → Branchiostomidae → Branchiostoma → Branchiostoma floridae (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Oceanic → Sediment → Mangrove Soil → Mangrove Soil Microbial Communities From Bertioga, Brazil, Sampling Enzymes

Source Dataset Sampling Location

• Location Name: South America Atlantic Tropical Mangrove
• Coordinates
  • Lat. (^o): -23.89694
  • Long. (^o): -46.20778

Associated Families

Family	Category	Number of Sequences	3D Structure?
F012756	Metagenome / Metatranscriptome	277	Y

Sequences

Protein ID	Family	RBS	Sequence
BMAI_11374041	F012756	AGGAG	MRIRTAKIEELLPKPRARALSPRQLAALQREEEIRKALAKLKTDEDIVAIELDPADKVPTMRAAVKKAIAAHRPGTSMAIRGRTIYISTGRLPGGRGRKPSA*