Scaffold JakoDRAFT_10008535

Overview

Basic Information

• Taxon OID: 3300002553
• Scaffold ID: JakoDRAFT_10008535
• Source Dataset Name: Bacteria associated with jakobid flagellates
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Genome Quebec
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1652
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 3 (100.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: All Organisms → Viruses → Predicted Viral (Source: DeepVirFinder)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Unclassified → Unclassified → Unclassified → Unclassified → Freshwater Jakobid Flagellates Associated → Freshwater Jakobid Flagellates Associated Microbial Communities From Zagora City, Morocco

Source Dataset Sampling Location

• Location Name: Eastern part of Anti-Atlas mountain range near Zagora City, Morocco
• Coordinates
  • Lat. (^o): 30.350367
  • Long. (^o): -5.836196

Associated Families

Family	Category	Number of Sequences	3D Structure?
F018530	Metagenome / Metatranscriptome	234	Y

Sequences

Protein ID	Family	RBS	Sequence
JakoDRAFT_100085351	F018530	GAG	MTNVNRDTLQGLPGVTPMFQAFVQSVRLYTRDFPELNRLLSGEESTDRQIAWSVLDAVSDFNGTPHFTTLSLDDLLGRSLQYLLLRMTVISLIEQVGLLQTRNHINYSTGGINVGINDKTPLLMNWLQYFRAFTDQRKQQVKVALNIEGILGPTNSGVFSEYWAVNSTYAQF*