Scaffold JGI24694J35173_10101497

Overview

Basic Information

• Taxon OID: 3300002552
• Scaffold ID: JGI24694J35173_10101497
• Source Dataset Name: Cornitermes sp. P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Co191P1
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1374
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (33.33%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (33.33%)
• Associated Families: 3

Taxonomy: All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut → Cubitermes And Nasutitermes Termite Gut Microbial Communities From Max Planck Institute For Terrestrial Microbiology, Germany

Source Dataset Sampling Location

• Location Name: Petit - Saut dam, French Guiana
• Coordinates
  • Lat. (^o): 5.0626
  • Long. (^o): -53.0462

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000298	Metagenome	1341	Y
F000848	Metagenome	861	Y
F066895	Metagenome	126	Y

Sequences

Protein ID	Family	RBS	Sequence
JGI24694J35173_101014971	F066895	N/A	MAANMWENSLKNVESDNNKILYETLLDFFFKSKRTYFLSESRTT*
JGI24694J35173_101014972	F000848	AGGA	MFNEGRENVHDEARSGRPSLVNDDLVRKVNERVRDDRRFTISDLSLHFPHISRTLLYXTVSSG*
JGI24694J35173_101014973	F000298	N/A	MFKTMEGAADCEIRSVIRVLKAKKVVPSKIHHQICQVYGDNAMSDXMVRKWGSDVQ*