Basic Information | |
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Taxon OID | 3300002503 Open in IMG/M |
Scaffold ID | C687J35164_10193423 Open in IMG/M |
Source Dataset Name | Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 583 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Loam → Unclassified → Soil → Soil Microbial Communities From Rifle, Colorado, Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | Rifle, Colorado, United States | |||||||
Coordinates | Lat. (o) | 39.534762 | Long. (o) | -107.782602 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F008521 | Metagenome / Metatranscriptome | 332 | Y |
Protein ID | Family | RBS | Sequence |
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C687J35164_101934232 | F008521 | AGGTGG | MNAKNQKPNLRSEKTQSASFPIWTISGLYLLAMVWFLLSAMGGYGAQETKQWLAPVVVAFTVSYGVLMLLLWPHEKSHL* |
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