Scaffold JGI24701J34945_10117949

Overview

Basic Information

• Taxon OID: 3300002469
• Scaffold ID: JGI24701J34945_10117949
• Source Dataset Name: Microcerotermes parvus P3 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Th196 P3
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 987
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (33.33%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Associated Families: 2

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut → Cubitermes And Nasutitermes Termite Gut Microbial Communities From Max Planck Institute For Terrestrial Microbiology, Germany

Source Dataset Sampling Location

• Location Name: Pointe-Noire, Republic of the Congo
• Coordinates
  • Lat. (^o): -4.7
  • Long. (^o): 11.83

Associated Families

Family	Category	Number of Sequences	3D Structure?
F027231	Metagenome	195	Y
F057471	Metagenome	136	Y

Sequences

Protein ID	Family	RBS	Sequence
JGI24701J34945_101179491	F057471	AGGA	MIRTIHDATIVNKGRKDRKTNMEIKKSNAVVQYSKFVKGIDSTDQYLSYYSVLQ
JGI24701J34945_101179492	F027231	N/A	VRLVQALLDRNVRVYGTRRANRGIPRDLEGEGKXLKKGKSAFRRNGEVMVEVWKDKTCANDTYDP*