Scaffold JGI24702J35022_10288568

Overview

Basic Information

• Taxon OID: 3300002462
• Scaffold ID: JGI24702J35022_10288568
• Source Dataset Name: Microcerotermes parvus P4 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Th196 P4
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 965
• Total Scaffold Genes: 2
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Teleostomi → Euteleostomi → Sarcopterygii → Dipnotetrapodomorpha → Tetrapoda → Amniota → Sauropsida → Sauria → Lepidosauria → Squamata → Bifurcata → Unidentata → Episquamata → Toxicofera → Iguania → Phrynosomatidae → Phrynosomatinae → Sceloporus → Sceloporus undulatus (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Arthropoda → Digestive System → Gut → Proctodeal Segment → Termite Gut → Cubitermes And Nasutitermes Termite Gut Microbial Communities From Max Planck Institute For Terrestrial Microbiology, Germany

Source Dataset Sampling Location

• Location Name: Pointe-Noire, Republic of the Congo
• Coordinates
  • Lat. (^o): -4.7
  • Long. (^o): 11.83

Associated Families

Family	Category	Number of Sequences	3D Structure?
F041283	Metagenome	160	Y

Sequences

Protein ID	Family	RBS	Sequence
JGI24702J35022_102885681	F041283	N/A	MVTNRDRKLSGLRRKNSKSFSDDWNR*RF*SSFRHFGTHFAQSFRTSKSS*MMDPTRSREMPSCSAIDLAEIQRSSTISSLICSINSGVVTVLGRPGRDASQVEKSPRLNLATQFLTVAYDGLCSPNLSVRMA*ISFGALPYRKKKLDDSSRLDVVE