Scaffold AADWTP_10002740

Overview

Basic Information

• Taxon OID: 3300002461
• Scaffold ID: AADWTP_10002740
• Source Dataset Name: Freshwater microbial communities from a drinking water treatment plant in Ann Arbor, Michigan, USA
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 32460
• Total Scaffold Genes: 32
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 23 (71.88%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (100.00%)
• Associated Families: 2

Taxonomy: All Organisms → cellular organisms → Bacteria (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Freshwater → Freshwater Microbial Communities From A Drinking Water Treatment Plant In Ann Arbor, Michigan, Usa

Source Dataset Sampling Location

• Location Name: Ann Arbor, Michigan, USA
• Coordinates
  • Lat. (^o): 42.296774
  • Long. (^o): -83.762994

Associated Families

Family	Category	Number of Sequences	3D Structure?
F003908	Metagenome / Metatranscriptome	462	Y
F020435	Metagenome	224	Y

Sequences

Protein ID	Family	RBS	Sequence
AADWTP_1000274019	F020435	AGGAGG	VTRFSEVVSALSPTQFTELALVLFVAVFVAVAWRHGTKRRAVEHAACAQLPLANDEAP*
AADWTP_1000274031	F003908	AGGA	MKTWICTAAVLAATTSCGSPAKKKLTLQEMIAADPLPLAKGAKWSYNVTLTKFDVATNKEITSTMQWTTEVIDAKEQNGVTAYRVKGWPTDLADATEGTPVASERTILRSGNNIMFGGPNDWAGEPSLDGAEGWFSWPVIDGQEICPSAEMVYCWQVSAVDSGYRLTFYTGPDEQAFDIEPATGIARFYYAHHGTTNEVEAVLSEYSAPKR*