Scaffold meta401DRAFT_123737

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold meta401DRAFT_123737

Scaffold meta401DRAFT_123737

Overview

Basic Information
Taxon OID	3300002259 Open in IMG/M
Scaffold ID	meta401DRAFT_123737 Open in IMG/M
Source Dataset Name	Muck sample
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	718
Total Scaffold Genes	2 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	1 (50.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	1

Taxonomy
All Organisms → cellular organisms → Bacteria	(Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Terrestrial → Unclassified → Unclassified → Unclassified → Petroleum Byproduct → Petroleum Byproduct Microbial Communities From Gujarat, India

Source Dataset Sampling Location
Location Name
Coordinates	Lat. (^o)	23.03142	Long. (^o)	70.21517	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F037780	Metagenome / Metatranscriptome	167	Y

Sequences

Protein ID	Family	RBS	Sequence
meta401DRAFT_1237372	F037780	N/A	GSAASGRPEGGDDDGTTPMQKSDLLIVARRPVKAGRAKEEMD*

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