Basic Information | |
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Taxon OID | 3300002238 Open in IMG/M |
Scaffold ID | JGI20169J29049_11425269 Open in IMG/M |
Source Dataset Name | Nasutitermes corniger P1 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P1 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 2958 |
Total Scaffold Genes | 6 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (16.67%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 2 |
Taxonomy | |
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All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Malvales → Malvaceae → Sterculioideae → Pterygota | (Source: UniRef50) |
Source Dataset Ecosystem |
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Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut → Cubitermes And Nasutitermes Termite Gut Microbial Communities From Max Planck Institute For Terrestrial Microbiology, Germany |
Source Dataset Sampling Location | ||||||||
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Location Name | laboratory colony in Florida, USA | |||||||
Coordinates | Lat. (o) | 26.0625 | Long. (o) | -80.2332 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F000731 | Metagenome | 916 | Y |
F001002 | Metagenome | 809 | Y |
Protein ID | Family | RBS | Sequence |
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JGI20169J29049_114252691 | F001002 | N/A | DISRLKVNNLTLILLSGENGELLIMPASSRWVLIWVLKG* |
JGI20169J29049_114252692 | F000731 | N/A | LYVIKLARSGSVQRFVGPEPFLGVSRQNIRRKMKHWMEKQHVALWRGPCNTQGQAQELISGPNLATGARLLSFNRTQSRVAIRLLTGHNTLRRHLYIMGQSNNPTCRKCGTEEETSVHILCECEALGSPRHTYLGSFYLDLEDIRKLGVGAIWNFAKGIGLL* |
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