Scaffold M1t2FKB2103N_1573142

Overview

Basic Information

• Taxon OID: 3300002230
• Scaffold ID: M1t2FKB2103N_1573142
• Source Dataset Name: Marine microbial communities from the Baltic Sea - M1t2 FKB2 (103N)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Karolinska Institutet
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 4573
• Total Scaffold Genes: 7
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 6 (85.71%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From The Baltic Sea Examining Degradability Of Arctic, Terrigenous Carbon Compounds In The Sea

Source Dataset Sampling Location

• Location Name: Baltic Sea
• Coordinates
  • Lat. (^o): 58.133
  • Long. (^o): 10.0
  • Depth (m): 1

Associated Families

Family	Category	Number of Sequences	3D Structure?
F074917	Metagenome / Metatranscriptome	119	N

Sequences

Protein ID	Family	RBS	Sequence
M1t2FKB2103N_15731427	F074917	N/A	MRFAETKRQKPTSFLTTKAKNKLDTIRQNPINQQKKQCGDRCHYKHSQCSSAGFTPRRPRNPVDFLTDLSNKLCGRHFSHRYLPIQVLINHDMAINTLRFPWVFDQANG