Basic Information | |
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Taxon OID | 3300002173 Open in IMG/M |
Scaffold ID | JGI24709J26583_10107932 Open in IMG/M |
Source Dataset Name | Biogas fermentation microbial communities from Germany - Plant 2 DNA1 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 882 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (33.33%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified → Biogas Fermentantion → Biogas Fermentation Microbial Communities From Biogas Plants In Germany |
Source Dataset Sampling Location | ||||||||
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Location Name | Bielefeld, North Rhine-Westphalia, Germany | |||||||
Coordinates | Lat. (o) | 52.0385 | Long. (o) | 8.4956 | Alt. (m) | Depth (m) | 0 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F033857 | Metagenome / Metatranscriptome | 176 | Y |
Protein ID | Family | RBS | Sequence |
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JGI24709J26583_101079322 | F033857 | AGCAGG | MVEIIDLSTISPKPVVVRIGNGNEIEEIDLTIVPARATLLLSEATQRHGGWEKIPDDEMIPAIAAICQQSNPKVTAEWLATKLTRPQLIGLAQVVIAQAFRRWGNQKRDDEEQDGDIKNR |
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