Scaffold S2t7BSb_11687979

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold S2t7BSb_11687979

Scaffold S2t7BSb_11687979

Overview

Basic Information
Taxon OID	3300002145 Open in IMG/M
Scaffold ID	S2t7BSb_11687979 Open in IMG/M
Source Dataset Name	S2t7BSb (114f)
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	5817
Total Scaffold Genes	20 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	5 (25.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
All Organisms → Viruses	(Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine → Marine Microbial Communities From The Baltic Sea, Analyzing Arctic Terrigenous Carbon Compounds

Source Dataset Sampling Location
Location Name
Coordinates	Lat. (^o)	57.305	Long. (^o)	20.0745	Alt. (m)		Depth (m)	1
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F017044	Metagenome	243	Y

Sequences

Protein ID	Family	RBS	Sequence
S2t7BSb_116879799	F017044	GGA	MKTIKYLKDNYLQLDNKIYKPYSICDLAGTKFGEQDRDGYSHITEWFNHKGYTYIFDKTIKNEK*

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