Scaffold M2t2BS2_10545415

Overview

Basic Information

• Taxon OID: 3300002144
• Scaffold ID: M2t2BS2_10545415
• Source Dataset Name: Marine microbial communities from the Baltic Sea, analyzing arctic terrigenous carbon compounds - M2t2BS2 (113f)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 8690
• Total Scaffold Genes: 13
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 10 (76.92%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (66.67%)
• Associated Families: 3

Taxonomy: All Organisms → cellular organisms → Bacteria (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine → Marine Microbial Communities From The Baltic Sea, Analyzing Arctic Terrigenous Carbon Compounds

Source Dataset Sampling Location

• Location Name: Baltic Sea
• Coordinates
  • Lat. (^o): 57.305
  • Long. (^o): 20.0745

Associated Families

Family	Category	Number of Sequences	3D Structure?
F001091	Metagenome / Metatranscriptome	781	Y
F022836	Metagenome / Metatranscriptome	212	Y
F073540	Metagenome / Metatranscriptome	120	N

Sequences

Protein ID	Family	RBS	Sequence
M2t2BS2_1054541512	F073540	AGAAG	MEILWAISNLFRKKPKMFEEGKDFVFINFKDTDITGLQIISGEYTDVVYHYHQAKIVEEGALARLKFGFTIVHPGKHDIDLLQNDEKFVTIMGDILTQILMNKAKADEQIRTGNSEEFDLQ*
M2t2BS2_105454156	F001091	N/A	MNTREIAKRLAVEYKLPRAEKYDLAYRVFDDMVEVIGWMQDPTYNMNDFEGREMLFPKRWITIGVLPSDTQVSL*
M2t2BS2_105454157	F022836	AGG	MTIKLTTLKTGQTFIAELDCTGEKEISLKQPVQVILQNTQQGPMMGFAPFLDFAEEFLTGIKISMDNVICITTPTTELVNQYNKVFGSGIQIAAAMPKNVL*