Scaffold M3t6FKB2_10585149

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold M3t6FKB2_10585149

Scaffold M3t6FKB2_10585149

Overview

Basic Information
Taxon OID	3300002143 Open in IMG/M
Scaffold ID	M3t6FKB2_10585149 Open in IMG/M
Source Dataset Name	M3t6FKB2 (118f)
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	1893
Total Scaffold Genes	3 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	2 (66.67%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	(Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine → Marine Microbial Communities From The Baltic Sea, Analyzing Arctic Terrigenous Carbon Compounds

Source Dataset Sampling Location
Location Name
Coordinates	Lat. (^o)	65.3915	Long. (^o)	23.49916667	Alt. (m)		Depth (m)	1
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F091935	Metagenome / Metatranscriptome	107	N

Sequences

Protein ID	Family	RBS	Sequence
M3t6FKB2_105851492	F091935	GAG	MPEPRTDSVRPIRAAFALLANRYVRVCFALLTVVAMTGCGHSQACQFDDYPRDDVWMAVVQASRAPRYPDWIVVENKLKVDDAARRVTVYRDLRRDLVEPGLSPQREELQWRFSAVVSAQSPTTVTFSSPDWAVPAHFWKEADHFFGQVRMRLGELGPVRPVPGDPMGGAPAEGSRDPNTPGHMSEKPAEGQLAAP*

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