Scaffold M2t6BS2

Basic Information
Taxon OID	3300002132 Open in IMG/M
Scaffold ID	M2t6BS2_1635306 Open in IMG/M
Source Dataset Name	Marine microbial communities from the Baltic Sea, analyzing arctic terrigenous carbon compounds - M2t6BS2 (105f)
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center
Sequencing Status	Permanent Draft

Basic Information

Taxon OID

3300002132 Open in IMG/M

Scaffold ID

M2t6BS2_1635306 Open in IMG/M

Source Dataset Name

Marine microbial communities from the Baltic Sea, analyzing arctic terrigenous carbon compounds - M2t6BS2 (105f)

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

Sequencing Status

Permanent Draft

Scaffold Components
Scaffold Length (bps)	74782
Total Scaffold Genes	98 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	83 (84.69%)
Novel Protein Genes	6 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	5 (83.33%)
Associated Families	6

Scaffold Components

Scaffold Length (bps)

74782

Total Scaffold Genes

98 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

83 (84.69%)

Novel Protein Genes

6 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

5 (83.33%)

Associated Families

Taxonomy
Not Available	(Source: )

Taxonomy

Not Available

(Source: )

Source Dataset Ecosystem
Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine → Marine Microbial Communities From The Baltic Sea, Analyzing Arctic Terrigenous Carbon Compounds

Source Dataset Ecosystem

Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine → Marine Microbial Communities From The Baltic Sea, Analyzing Arctic Terrigenous Carbon Compounds

Source Dataset Sampling Location
Location Name	Baltic Sea
Coordinates	Lat. (^o)	57.305	Long. (^o)	20.0745	Alt. (m)	Depth (m)	1
Location on Map

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Source Dataset Sampling Location

Location Name

Baltic Sea

Coordinates

Lat. (^o)

57.305

Long. (^o)

20.0745

Alt. (m)

Depth (m)

Location on Map

Zoom:

Associated Families

Family	Category	Number of Sequences	3D Structure?
F003268	Metagenome / Metatranscriptome	496	Y
F004276	Metagenome / Metatranscriptome	445	Y
F004865	Metagenome / Metatranscriptome	420	Y
F026214	Metagenome / Metatranscriptome	198	Y
F027425	Metagenome / Metatranscriptome	194	Y
F063400	Metagenome / Metatranscriptome	129	Y

Sequences

Protein ID	Family	RBS	Sequence
M2t6BS2_163530626	F003268	AGG	MSQNNLPATLPTVEKLIQRISIADRSQQKEIRITIQEARDLTAELAILTARLGRTVGEIHQYLAEIKESTTNIDVKFDGGNF*
M2t6BS2_163530642	F026214	AGGA	MAKNYKDYSYFANRPDVVKVWEDLEAYLDWCRFELREFNPADLYRRDSQNYGAYLASKRPRRPYQGNKPRFDNNKPRFDNNKPRFDNNSPRFERGTR*
M2t6BS2_163530647	F063400	AGG	MSSTFTLNRTQVEKLAKMTQHFKEVEWFTLEETRCSGIGPTVTVKFNLFNDNDKDNDTTVDITDVSTW*
M2t6BS2_163530650	F027425	N/A	MIKGLQGITGVSVEGGNTALPYVGPNPNNPMTGMLRIHGTEMEVFNGSSWQMLSTSYATVGLDQDVLDIVQWARKKRDEEMMWQSLATDNKAVKIALDNLEQARQQLDITAKLAREYEQTTS*
M2t6BS2_163530662	F004276	AGGAG	MLLREMFSPIGAPKDETEEINWLDDLKFYIDNDDKMLNRYFFPAVKRHKEHKGNPNAFKVYIRPIEHCLDHYCQKYDIDDREKKFPKEKLIDLARHFAEDQEKFIGKGDYE*
M2t6BS2_163530676	F004865	GGAG	MSARYMIVSYYQQANGKWDEITEFKNSIKMKHTQTAKVILDFKEKKCVKNLLNPNAGYEDMLEFYKRMIGDRLTPHLPKD*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold M2t6BS2_1635306

Overview

Ecosystem & Geography

Associated Families

Sequences