Scaffold M2t6BS2_1441475

Overview

Basic Information

• Taxon OID: 3300002132
• Scaffold ID: M2t6BS2_1441475
• Source Dataset Name: Marine microbial communities from the Baltic Sea, analyzing arctic terrigenous carbon compounds - M2t6BS2 (105f)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 11535
• Total Scaffold Genes: 26
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 5 (19.23%)
• Novel Protein Genes: 4
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 4

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine → Marine Microbial Communities From The Baltic Sea, Analyzing Arctic Terrigenous Carbon Compounds

Source Dataset Sampling Location

• Location Name: Baltic Sea
• Coordinates
  • Lat. (^o): 57.305
  • Long. (^o): 20.0745
  • Depth (m): 1

Associated Families

Family	Category	Number of Sequences	3D Structure?
F001283	Metagenome / Metatranscriptome	731	N
F003110	Metagenome / Metatranscriptome	506	Y
F005664	Metagenome / Metatranscriptome	393	N
F053138	Metagenome / Metatranscriptome	141	N

Sequences

Protein ID	Family	RBS	Sequence
M2t6BS2_14414751	F053138	N/A	MIGLFEVSATKAGKTISCTMFGNIAEKEQLFGELMNQHKIAQSERHLWKLSNITTKYNSFDNDAF*
M2t6BS2_144147512	F003110	N/A	MKQVLFLALLTVAKLASAQTSEIPLTSICIQDSIHTPVELYKADNIRLNTLYRELQLCDSLRILELYELNDQKQISTQYKKSLDLKTQMLKNSAADTRDKIVKLRRTRKVLSWAIVAMVFEGFIIYIK*
M2t6BS2_144147514	F005664	N/A	MNNELHNLENDFNRSRDMSLINCLLVAETIPHVDGAYIVTTFSKYHDDEQYIICCIEDNHDMRILLDVAVEIGEFIDWIVDNDLHHQEDDEYNPFSSYGHDSIKRDLEFYDYCNAENMLQYLQEGGKRKVKYSR*
M2t6BS2_14414752	F001283	N/A	MTNQEAKEILNKPIICKEAERSIREMKIKLSKYTGDKSEQTKHLSNLDNLLNLAHKQAIDIDTYEDLLATYLFKIGEQQAKIRELVEMHAISEHIHEVGIDEVVKDFKSKIQLR*