Scaffold M2t2BS1_1307710

Overview

Basic Information

• Taxon OID: 3300002131
• Scaffold ID: M2t2BS1_1307710
• Source Dataset Name: Marine microbial communities from the Baltic Sea, analyzing arctic terrigenous carbon compounds - M2t2BS1 (111f)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 24502
• Total Scaffold Genes: 27
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 23 (85.19%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine → Marine Microbial Communities From The Baltic Sea, Analyzing Arctic Terrigenous Carbon Compounds

Source Dataset Sampling Location

• Location Name: Baltic Sea
• Coordinates
  • Lat. (^o): 57.305
  • Long. (^o): 20.0745
  • Depth (m): 1

Associated Families

Family	Category	Number of Sequences	3D Structure?
F025393	Metagenome / Metatranscriptome	202	Y

Sequences

Protein ID	Family	RBS	Sequence
M2t2BS1_130771020	F025393	GGAG	MKSHYEILAPYRQQYQQESNEPDLISPEARHKYAMFVKGNDHLINGRTYCSKDEDGNYISCFVSQYSDIIERNLEPGIRKAVLSLHEKGYLTFTSCQGHDDSRHRYIGVLFNTKEQKHDFISEVDKLDCNVYWYDNVLNSVERPCTESEWWDDGGMTVHIVYDDKKFHEVPQQKCRENPYTDEELTKFWNIQSNRNYSHYECIVFSFGYPMVETSFWKAVKKYFFYDQTKVNAAYSDFLTKVDNLSDYLA*