Scaffold GOS2242_1040051

Overview

Basic Information

• Taxon OID: 3300001967
• Scaffold ID: GOS2242_1040051
• Source Dataset Name: Marine microbial communities from Devil's Crown, Floreana Island, Equador - GS027
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: J. Craig Venter Institute (JCVI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1717
• Total Scaffold Genes: 5
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 3 (60.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (100.00%)
• Associated Families: 2

Taxonomy: All Organisms → Viruses → Predicted Viral (Source: DeepVirFinder)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine → Marine Microbial Communities From Global Ocean Sampling (Gos)

Source Dataset Sampling Location

• Location Name: Devil's Crown, Floreana Island, Equador
• Coordinates
  • Lat. (^o): -1.2161111
  • Long. (^o): -90.422775
  • Depth (m): 2.2

Associated Families

Family	Category	Number of Sequences	3D Structure?
F008851	Metagenome / Metatranscriptome	327	Y
F015681	Metagenome / Metatranscriptome	253	Y

Sequences

Protein ID	Family	RBS	Sequence
GOS2242_10400512	F008851	AGTAGG	MIKKYQVVENYSSTEGTLYKGEILKEDANNTLKDHKRLKDSMGRVWFVPHKYIVRI*
GOS2242_10400514	F015681	AGGA	MAYQKSDYENYLLVSQHTKMLGGTYPKYIKTKALMSSLNSMVGKQSNTYIYNGESYVSSLTNAEISKIQSAFDYGTYNSSIEKLKYIFMDIGDRLF*