Scaffold GOS2249_1034294

Overview

Basic Information

• Taxon OID: 3300001951
• Scaffold ID: GOS2249_1034294
• Source Dataset Name: Marine microbial communities from North Seamore Island, Equador - GS034
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: J. Craig Venter Institute (JCVI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1637
• Total Scaffold Genes: 4
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 2

Taxonomy: All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine → Marine Microbial Communities From Global Ocean Sampling (Gos)

Source Dataset Sampling Location

• Location Name: North Seamore Island, Equador
• Coordinates
  • Lat. (^o): -0.38305557
  • Long. (^o): -90.279724
  • Depth (m): 2.1

Associated Families

Family	Category	Number of Sequences	3D Structure?
F033459	Metagenome	177	Y
F077386	Metagenome	117	N

Sequences

Protein ID	Family	RBS	Sequence
GOS2249_10342941	F077386	N/A	MSKAPKDKQNLERDVKLRYCVQSGQSSIHGETLYEVQTQEAQSFSFHSGTGQGSTGKGPGTGKAVLYTPGCSMEILGEGLKVRSPGDISQLPAKIIKCKKGDILFDVENGDITFRARNINFEAVGGGQDGQFLAKATRVATIDAPDVRLQAEKILIKSDNQINIISKGFLELKSGFTLSASFADDSFGTMSQVLKAATTISPPTL*
GOS2249_10342942	F033459	N/A	MNISRQQLDKLVVGTNDVSFVPPDTSPTGTAVLNGPVYVGDTAASPGY