Scaffold GOS2249_1005125

Overview

Basic Information

• Taxon OID: 3300001951
• Scaffold ID: GOS2249_1005125
• Source Dataset Name: Marine microbial communities from North Seamore Island, Equador - GS034
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: J. Craig Venter Institute (JCVI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1475
• Total Scaffold Genes: 4
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 2 (50.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine → Marine Microbial Communities From Global Ocean Sampling (Gos)

Source Dataset Sampling Location

• Location Name: North Seamore Island, Equador
• Coordinates
  • Lat. (^o): -0.38305557
  • Long. (^o): -90.279724
  • Depth (m): 2.1

Associated Families

Family	Category	Number of Sequences	3D Structure?
F085802	Metagenome	111	Y

Sequences

Protein ID	Family	RBS	Sequence
GOS2249_10051252	F085802	GAG	LVKKLPSNNKKLLSITYLKVIKVPTKITPQQAAIAEKIPVLINVVFLLIILLRIFIFKRRIYIPQYTH*