Basic Information | |
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Taxon OID | 3300001839 Open in IMG/M |
Scaffold ID | RCM40_1016553 Open in IMG/M |
Source Dataset Name | Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM40, ROCA_DNA238_2.0um_Ob_C_3b |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 2408 |
Total Scaffold Genes | 7 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 5 (71.43%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton → Marine Plankton Microbial Communities From The Amazon River Plume, Atlantic Ocean |
Source Dataset Sampling Location | ||||||||
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Location Name | Ábidos, Para, Brazil | |||||||
Coordinates | Lat. (o) | -1.919017 | Long. (o) | -55.525717 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F070194 | Metagenome / Metatranscriptome | 123 | N |
Protein ID | Family | RBS | Sequence |
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RCM40_10165531 | F070194 | N/A | HLKLHTNFVLDPVRGCDMFRRMKQTLFVVFDTETSCQAFPVYDMAWRIVDRQGREYNSGSYFMPDVIERITPIFRKHEEYPEYVAKGHVEQRLYQDVKDIFNRQVKTLQERGHRIVLVAYNADFDRKALKRTAELMGGSRRSRFFRFEPEWIDLWQYWAESAPLHYTSERLTESGNWKSSLEEVYRFENHNPAGYVEKHTAWSDTDDAISVLEKVLRRKKRMPIYKGDAWMPGGWRALQKRCPGPGKKLALS* |
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