Scaffold ACM24_1009424

Overview

Basic Information

• Taxon OID: 3300001833
• Scaffold ID: ACM24_1009424
• Source Dataset Name: Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM24, ROCA_DNA012_0.2um_2l
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 2271
• Total Scaffold Genes: 8
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 7 (87.50%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: All Organisms → Viruses → Predicted Viral (Source: DeepVirFinder)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton → Marine Plankton Microbial Communities From The Amazon River Plume, Atlantic Ocean

Source Dataset Sampling Location

• Location Name: Amazon River plume to Atlantic Ocean
• Coordinates
  • Lat. (^o): 10.2885
  • Long. (^o): -54.512

Associated Families

Family	Category	Number of Sequences	3D Structure?
F036279	Metagenome / Metatranscriptome	170	N

Sequences

Protein ID	Family	RBS	Sequence
ACM24_10094245	F036279	AGG	MKGTKHTLKTLFIIFSFVSMTACSVPFANGVNGKDIIKIANAGKNIKNITKEGATEELITETKNILKSIQNGGKAQR*