Scaffold CSTRM36_1004116

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold CSTRM36_1004116

Scaffold CSTRM36_1004116

Overview

Basic Information
Taxon OID	3300001761 Open in IMG/M
Scaffold ID	CSTRM36_1004116 Open in IMG/M
Source Dataset Name	Wastewater microbial communities from Belvaux, Luxembourg - M36
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	2467
Total Scaffold Genes	7 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	6 (85.71%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
All Organisms → cellular organisms → Bacteria	(Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem
Engineered → Wastewater → Unclassified → Unclassified → Unclassified → Wastewater → Wastewater Microbial Communities From Belvaux, Luxembourg

Source Dataset Sampling Location
Location Name	Belvaux, Luxembourg
Coordinates	Lat. (^o)	49.506095	Long. (^o)	5.943536	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F029455	Metagenome / Metatranscriptome	188	Y

Sequences

Protein ID	Family	RBS	Sequence
CSTRM36_10041164	F029455	GAG	MADRVIDLDLWGEGAERLPAITITGQGLRIEGSQAEFDRLILIIGGWMK*

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