Scaffold CSTRM44_108994

Overview

Basic Information

• Taxon OID: 3300001759
• Scaffold ID: CSTRM44_108994
• Source Dataset Name: Wastewater microbial communities from Belvaux, Luxembourg - M44
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 2913
• Total Scaffold Genes: 8
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 7 (87.50%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 3 (100.00%)
• Associated Families: 3

Taxonomy: All Organisms → Viruses → Predicted Viral (Source: DeepVirFinder)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Unclassified → Unclassified → Unclassified → Wastewater → Wastewater Microbial Communities From Belvaux, Luxembourg

Source Dataset Sampling Location

• Location Name: Belvaux, Luxembourg
• Coordinates
  • Lat. (^o): 49.506095
  • Long. (^o): 5.943536

Associated Families

Family	Category	Number of Sequences	3D Structure?
F021262	Metagenome / Metatranscriptome	219	N
F024321	Metagenome / Metatranscriptome	206	N
F033819	Metagenome / Metatranscriptome	176	Y

Sequences

Protein ID	Family	RBS	Sequence
CSTRM44_1089944	F021262	AGGAG	MSKKYYIKFNTGKELTGTAKEIVTQLRNESRLLAITPRKYAKLVAKSYEMSTGLKLRTWTYNSFVKSLGKSLMVMEFKEVK*
CSTRM44_1089946	F024321	GGAGG	MLDEILKLIAGMAGLGAFTSMLINLLKVAGLVKDGQADKAFKLADLIVFVIVTVIYLTKTPVDWSQVDEWLVLLTALLGYVVSVFSGEFTHDTIKGTPLIGYSYSEKKPKD*
CSTRM44_1089947	F033819	GAGG	MEASEPKQSRVTNTAIQSQLIELSVRLARMEKDIQEIKNNLSESGDKVISLEKSEAGRYPLIDRRLDNLEKRTDKHGNEIDELIKITQSLANTNKVLTWVAGLAGAGVLSWLIAQILSLIG*