Scaffold CSTRM44_105559

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

x

This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK

Scaffold CSTRM44_105559

Scaffold CSTRM44_105559

Overview

Basic Information
Taxon OID	3300001759 Open in IMG/M
Scaffold ID	CSTRM44_105559 Open in IMG/M
Source Dataset Name	Wastewater microbial communities from Belvaux, Luxembourg - M44
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	4687
Total Scaffold Genes	16 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	15 (93.75%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Engineered → Wastewater → Unclassified → Unclassified → Unclassified → Wastewater → Wastewater Microbial Communities From Belvaux, Luxembourg

Source Dataset Sampling Location
Location Name	Belvaux, Luxembourg
Coordinates	Lat. (^o)	49.506095	Long. (^o)	5.943536	Alt. (m)		Depth (m)
Location on Map

Zoom:	Powered by OpenStreetMap^©

Associated Families

Family	Category	Number of Sequences	3D Structure?
F001938	Metagenome / Metatranscriptome	614	Y

Sequences

Protein ID	Family	RBS	Sequence
CSTRM44_1055598	F001938	AGGAG	MIEKIYKNKYMVICDNCGTGQECDSWADVMDFMNEEAWKKKLVDGEWKHFCPECVEAELIEDFRNRL*

© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.