Scaffold CSTRM28_102857

Overview

Basic Information

• Taxon OID: 3300001754
• Scaffold ID: CSTRM28_102857
• Source Dataset Name: Wastewater microbial communities from Belvaux, Luxembourg - M28
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 2042
• Total Scaffold Genes: 5
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 3 (60.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Associated Families: 2

Taxonomy: All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009 (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Unclassified → Unclassified → Unclassified → Wastewater → Wastewater Microbial Communities From Belvaux, Luxembourg

Source Dataset Sampling Location

• Location Name: Belvaux, Luxembourg
• Coordinates
  • Lat. (^o): 49.506095
  • Long. (^o): 5.943536

Associated Families

Family	Category	Number of Sequences	3D Structure?
F055749	Metagenome / Metatranscriptome	138	N
F095523	Metagenome / Metatranscriptome	105	N

Sequences

Protein ID	Family	RBS	Sequence
CSTRM28_1028571	F095523	GGAGG	MGVSIPIEYLYITVGLLVVAVIYIINDKNNARLYNPEGPLFVKARKKEIPILRVIDPGTNHARHILGDKERDDDPVYAKDMWGLHADPAYIEGDASPERHPGGLLIYNISPNVTFPISPRNVLAQHTILRHRRDLPEFADLDFLSDRDLLVLLSSPSDHLPHDAQIFTDNYKPTIVEIDESGQPVEVEMNAADLVDRITAFRKYATTLPVEGGGFAYHEYFRNNPYGHSSQTTQRINYLFQRIADRKSAMADKLW
CSTRM28_1028573	F055749	N/A	MNLIIAIAIGILTLIAIFSVIPVVGGSIDNAMPALGADSDWNTTTNPDLPSGASMWSQLGPLLVLAVLALVIGLVIMYFRNAAG*