Scaffold JGI24669J20092_10137019

Overview

Basic Information

• Taxon OID: 3300001744
• Scaffold ID: JGI24669J20092_10137019
• Source Dataset Name: Olavius algarvensis symbiont microbial communities from Tuscany, Italy - Type A ELBA extract 2
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 556
• Total Scaffold Genes: 1
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Amphiesmenoptera → Lepidoptera → Glossata → Neolepidoptera → Heteroneura → Ditrysia → Obtectomera → Bombycoidea → Bombycidae → Bombycinae → Bombyx → Bombyx mori (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Annelida → Digestive System → Unclassified → Unclassified → Marine Gutless Worms Symbiont → Marine Gutless Worms Symbiont Microbial Communities From Various Locations

Source Dataset Sampling Location

• Location Name: Italy: Sant'Andrea, Tuscany
• Coordinates
  • Lat. (^o): 42.8072
  • Long. (^o): 10.1411
  • Depth (m): 6

Associated Families

Family	Category	Number of Sequences	3D Structure?
F058500	Metagenome	135	N

Sequences

Protein ID	Family	RBS	Sequence
JGI24669J20092_101370191	F058500	N/A	RMTTHSVTGTTPNLAMLGREVLIPATLIAQPPDEPSKPVTPYVTTFRSTIRDVHHRIRLNTGAVAKTQKNYFDKFVRGSPFHVDQLVWLYWPRPLLRQQKRKLQRLWSGPWRIIXFQSSLVVVIQNLKTNKXQTVHVDRLAPCXSQQREQRDPSDTGVCNASNXQDSXPEHQNSVQPQIRKSGR