Basic Information | |
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Taxon OID | 3300001736 Open in IMG/M |
Scaffold ID | JGI24659J20068_1008720 Open in IMG/M |
Source Dataset Name | Marine viral communities from the Deep Pacific Ocean - MSP-131 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 960 |
Total Scaffold Genes | 5 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 4 (80.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean → Deep Ocean Microbial Communities From The Global Malaspina Expedition |
Source Dataset Sampling Location | ||||||||
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Location Name | Atlantic Ocean | |||||||
Coordinates | Lat. (o) | 17.4274 | Long. (o) | -59.8286 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F061287 | Metagenome | 132 | Y |
Protein ID | Family | RBS | Sequence |
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JGI24659J20068_10087202 | F061287 | AGGA | MMDKNDREVMIEQLMKLKLERKILDVMRDTEIRRLFSILKRYVK* |
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