Scaffold KiloMoana_10016505

Overview

Basic Information

• Taxon OID: 3300001680
• Scaffold ID: KiloMoana_10016505
• Source Dataset Name: Black smokers hydrothermal plume microbial communities from Kilo Moana, Pacific Ocean
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 3633
• Total Scaffold Genes: 8
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 4 (50.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 2

Taxonomy: All Organisms → Viruses → unclassified viruses → Circular genetic element sp. (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Black Smokers Hydrothermal Plume → Black Smokers Hydrothermal Plume Microbial Communities From Kilo Moana, Pacific Ocean

Source Dataset Sampling Location

• Location Name: Kilo Moana, Lau Basin, Pacific Ocean
• Coordinates
  • Lat. (^o): -20.054108
  • Long. (^o): -176.133522
  • Depth (m): 2600

Associated Families

Family	Category	Number of Sequences	3D Structure?
F005551	Metagenome	397	Y
F010737	Metagenome	300	N

Sequences

Protein ID	Family	RBS	Sequence
KiloMoana_100165053	F010737	N/A	MSVTTITRTYDSTPTDKTYFSLTSNMSSTSLGNIQTPQGSQRISRIDVAVDASDTKGFVLACRLLGSNMSEQNLTLAGSCGDVADAGGTPQFNMIPTNFSVAGVNNIDLQVAFQFSSGTPTASSLSVTLYFE*
KiloMoana_100165058	F005551	N/A	KDGKIYGWSGSYALTSSAVTLLDYTNPSAFYLTRVTLGIDWSSISAGEVLSYTINVDDQALFVEKLVVLINNIGIQPKMFEFIIPPNSTVKIQASESANNGAISCILTGYRV*